Open-source computational tools for analyzing large-scale biomedical data. All software is freely available on Bioconductor, CRAN, or GitHub.
Reference construction for supervised celltype in scRNA-seq.
Single-cell cell type-specific analysis.
Automated cell type classification for single-cell data.
Spot level representation learning in spatial transcriptomics.
Reference-free cell type deconvolution for bulk omics data.
Cell type specific differential analysis with cell type hierarchy.
Tumor purity estimation from DNA methylation microarray data.